A container for comparative niche analysis across multiple samples. Stores integrated information from multiple SingleSampNiche objects for cross-sample comparisons.
Slots
samp_infoList containing multi-sample information:
multi_id: Character, unique identifier for the multi-sample analysis
samp_id: Character vector, sample identifiers included
samp_grp: Character, sample group assignments
compare_mode: Character, comparison mode ("Comparative" or "Temporal")
niche_infoList of data frames containing niche metadata for each niche key across samples
niche_cellsList of data frames containing cell-level information for each niche key across samples
niche_genesList of data frames containing gene-level information for each niche key across samples
See also
Other niche-classes:
SingleSampNiche-class