Get SingleSampNiche information — GetSSNicheInfo • STID

Retrieves niche information from SingleSampNiche objects for specified samples.

Usage

GetSSNicheInfo(STID_obj, loop_id, niche_key, ...)

# S3 method for class 'STID'
GetSSNicheInfo(STID_obj = NULL, loop_id = "LoopAllSamp", niche_key = NULL, ...)

Arguments

STID_obj: An STID object
loop_id: Character vector, sample identifiers
niche_key: Character, niche key to retrieve
...: Additional arguments passed to methods

Value

List of niche information data frames, one per sample

Examples

if (FALSE) { # \dontrun{
niche_info <- GetSSNicheInfo(ist_obj,
                             loop_id = c("sample1", "sample2"),
                             niche_key = "niche_virulence")
} # }